Seita.3G216100.1

Description : SNARE-like superfamily protein

Gene families : OG_01_0003782 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003782_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G216100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR039652	Coatomer_zeta	PANTHER	63	236
IPR022775	AP_mu_sigma_su	Pfam	68	206
IPR011012	Longin-like_dom_sf	SUPERFAMILY	68	209
IPR011012	Longin-like_dom_sf	SUPERFAMILY	68	209
IPR039652	Coatomer_zeta	PANTHER	63	236
IPR022775	AP_mu_sigma_su	Pfam	68	206

No CAZYmes available for this sequence

External Links

No external refs found!