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  5. Seita.3G222600.1

Seita.3G222600.1


Description : Duplicated homeodomain-like superfamily protein


Gene families : OG_01_0013055 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013055_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G222600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009057 Homeobox-like_sf SUPERFAMILY 138 192
IPR017884 SANT_dom ProSiteProfiles 144 192
IPR017930 Myb_dom ProSiteProfiles 136 192
IPR009057 Homeobox-like_sf SUPERFAMILY 32 87
IPR001005 SANT/Myb SMART 140 190
IPR001005 SANT/Myb SMART 30 82
IPR001005 SANT/Myb ProSiteProfiles 136 188
IPR001005 SANT/Myb CDD 33 76
IPR001005 SANT/Myb ProSiteProfiles 32 67
IPR006447 Myb_dom_plants NCBIfam 139 190
IPR001005 SANT/Myb CDD 143 188
IPR001005 SANT/Myb Pfam 142 188
IPR001005 SANT/Myb Pfam 32 76
IPR009057 Homeobox-like_sf SUPERFAMILY 32 87
IPR001005 SANT/Myb ProSiteProfiles 136 188
IPR017930 Myb_dom ProSiteProfiles 136 192
IPR001005 SANT/Myb CDD 33 76
IPR009057 Homeobox-like_sf SUPERFAMILY 138 192
IPR001005 SANT/Myb ProSiteProfiles 32 67
IPR001005 SANT/Myb CDD 143 188
IPR001005 SANT/Myb SMART 140 190
IPR001005 SANT/Myb SMART 30 82
IPR006447 Myb_dom_plants TIGRFAM 139 190
IPR017930 Myb_dom Pfam 32 76
IPR017930 Myb_dom Pfam 143 187
IPR017884 SANT_dom ProSiteProfiles 144 192

No CAZYmes available for this sequence

No external refs found!