Seita.3G241800.1

Description : Transcription elongation factor (TFIIS) family protein

Gene families : OG_01_0002815 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002815_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G241800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR035441	TFIIS/LEDGF_dom_sf	Gene3D	173	269
IPR044805	MD26A/B-like	PANTHER	1	532
IPR003617	TFIIS/CRSP70_N_sub	SMART	182	257
IPR035441	TFIIS/LEDGF_dom_sf	SUPERFAMILY	181	265
IPR017923	TFIIS_N	ProSiteProfiles	183	258
IPR017923	TFIIS_N	Pfam	206	254
IPR044805	MD26A/B-like	PANTHER	3	534
IPR017923	TFIIS_N	ProSiteProfiles	183	258
IPR035441	TFIIS/LEDGF_dom_sf	Gene3D	173	269
IPR017923	TFIIS_N	Pfam	207	253
IPR035441	TFIIS/LEDGF_dom_sf	SUPERFAMILY	181	265
IPR003617	TFIIS/CRSP70_N_sub	SMART	182	257

No CAZYmes available for this sequence

External Links

No external refs found!