Seita.3G255800.1

Description : C-terminal domain phosphatase-like 4

Gene families : OG_01_0000716 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000716_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G255800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	ISM	GOs from InterProScan
MF	GO:0004722	protein serine/threonine phosphatase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
MF	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0070940	obsolete dephosphorylation of RNA polymerase II C-terminal domain	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140994	RNA polymerase II CTD heptapeptide repeat modifying activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR039189	Fcp1	PANTHER	8	498
IPR001357	BRCT_dom	Pfam	378	451
IPR023214	HAD_sf	Gene3D	145	378
IPR004274	FCP1_dom	Pfam	164	310
IPR036412	HAD-like_sf	SUPERFAMILY	154	316
IPR036420	BRCT_dom_sf	SUPERFAMILY	119	467
IPR011947	FCP1_euk	NCBIfam	157	312
IPR001357	BRCT_dom	ProSiteProfiles	375	467
IPR036420	BRCT_dom_sf	Gene3D	379	467
IPR001357	BRCT_dom	SMART	377	457
IPR004274	FCP1_dom	ProSiteProfiles	158	330
IPR004274	FCP1_dom	SMART	161	316
IPR004274	FCP1_dom	ProSiteProfiles	158	330
IPR011947	FCP1_euk	TIGRFAM	157	312
IPR001357	BRCT_dom	SMART	377	457
IPR039189	Fcp1	PANTHER	8	488
IPR001357	BRCT_dom	Pfam	378	451
IPR001357	BRCT_dom	ProSiteProfiles	375	467
IPR036420	BRCT_dom_sf	Gene3D	379	467
IPR036412	HAD-like_sf	SUPERFAMILY	154	316
IPR036420	BRCT_dom_sf	SUPERFAMILY	119	467
IPR004274	FCP1_dom	Pfam	164	311
IPR004274	FCP1_dom	SMART	161	316
IPR023214	HAD_sf	Gene3D	145	378

No CAZYmes available for this sequence

External Links

No external refs found!