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  5. Seita.3G269600.1

Seita.3G269600.1


Description : ribulose bisphosphate carboxylase small chain 1A


Gene families : OG_01_0003671 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003671_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G269600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_174


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024681 RuBisCO_ssu PANTHER 5 165
IPR000894 RuBisCO_ssu_dom CDD 55 164
IPR024680 RuBisCO_ssu_N Pfam 8 30
IPR036385 RuBisCO_ssu_sf Gene3D 46 168
IPR000894 RuBisCO_ssu_dom SMART 56 164
IPR024681 RuBisCO_ssu PRINTS 104 133
IPR024681 RuBisCO_ssu PRINTS 138 164
IPR024681 RuBisCO_ssu PRINTS 34 52
IPR024681 RuBisCO_ssu PRINTS 55 81
IPR024681 RuBisCO_ssu PRINTS 9 26
IPR024681 RuBisCO_ssu PRINTS 83 98
IPR000894 RuBisCO_ssu_dom Pfam 57 164
IPR000894 RuBisCO_ssu_dom Hamap 55 165
IPR036385 RuBisCO_ssu_sf SUPERFAMILY 46 166
IPR000894 RuBisCO_ssu_dom CDD 55 164
IPR000894 RuBisCO_ssu_dom Pfam 57 164
IPR036385 RuBisCO_ssu_sf Gene3D 46 168
IPR000894 RuBisCO_ssu_dom SMART 56 164
IPR036385 RuBisCO_ssu_sf SUPERFAMILY 46 166
IPR024681 RuBisCO_ssu PRINTS 104 133
IPR024681 RuBisCO_ssu PRINTS 138 164
IPR024681 RuBisCO_ssu PRINTS 34 52
IPR024681 RuBisCO_ssu PRINTS 55 81
IPR024681 RuBisCO_ssu PRINTS 9 26
IPR024681 RuBisCO_ssu PRINTS 83 98
IPR024681 RuBisCO_ssu PANTHER 1 167
IPR024680 RuBisCO_ssu_N Pfam 8 30

No CAZYmes available for this sequence

No external refs found!