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  5. Seita.3G307200.1

Seita.3G307200.1


Description : relative of early flowering 6


Gene families : OG_01_0005084 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005084_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G307200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_57


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003349 JmjN Pfam 19 52
IPR036236 Znf_C2H2_sf SUPERFAMILY 956 998
IPR013087 Znf_C2H2_type ProSiteProfiles 1000 1031
IPR013087 Znf_C2H2_type ProSitePatterns 1002 1026
IPR013087 Znf_C2H2_type ProSitePatterns 942 964
IPR003349 JmjN SMART 17 58
IPR003349 JmjN ProSiteProfiles 18 59
IPR036236 Znf_C2H2_sf SUPERFAMILY 988 1022
IPR003347 JmjC_dom Pfam 223 340
IPR003347 JmjC_dom ProSiteProfiles 189 358
IPR003347 JmjC_dom SMART 189 358
IPR013087 Znf_C2H2_type SMART 1000 1026
IPR013087 Znf_C2H2_type SMART 970 994
IPR013087 Znf_C2H2_type SMART 917 939
IPR013087 Znf_C2H2_type SMART 940 964
IPR013087 Znf_C2H2_type ProSitePatterns 972 994
IPR013087 Znf_C2H2_type ProSiteProfiles 940 969
IPR013087 Znf_C2H2_type ProSiteProfiles 970 999
IPR013087 Znf_C2H2_type ProSiteProfiles 940 969
IPR013087 Znf_C2H2_type ProSitePatterns 972 994
IPR013087 Znf_C2H2_type ProSitePatterns 1002 1026
IPR003347 JmjC_dom SMART 189 358
IPR003349 JmjN Pfam 19 52
IPR013087 Znf_C2H2_type ProSitePatterns 942 964
IPR013087 Znf_C2H2_type ProSiteProfiles 970 999
IPR036236 Znf_C2H2_sf SUPERFAMILY 988 1022
IPR003347 JmjC_dom Pfam 222 340
IPR003349 JmjN ProSiteProfiles 18 59
IPR003349 JmjN SMART 17 58
IPR036236 Znf_C2H2_sf SUPERFAMILY 956 998
IPR013087 Znf_C2H2_type ProSiteProfiles 1000 1031
IPR003347 JmjC_dom ProSiteProfiles 189 358
IPR013087 Znf_C2H2_type SMART 1000 1026
IPR013087 Znf_C2H2_type SMART 970 994
IPR013087 Znf_C2H2_type SMART 940 964
IPR013087 Znf_C2H2_type SMART 917 939

No CAZYmes available for this sequence

No external refs found!