Sevir.6G126500.2

Description : translation elongation factor Ts (EF-Ts), putative

Gene families : OG_01_0006378 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006378_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G126500.2
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G126500.2	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006414	translational elongation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR009060	UBA-like_sf	SUPERFAMILY	60	109
IPR036402	EF-Ts_dimer_sf	SUPERFAMILY	111	211
IPR001816	Transl_elong_EFTs/EF1B	PANTHER	33	370
IPR036402	EF-Ts_dimer_sf	SUPERFAMILY	219	369
IPR036402	EF-Ts_dimer_sf	Gene3D	110	214
IPR018101	Transl_elong_Ts_CS	ProSitePatterns	129	139
IPR014039	Transl_elong_EFTs/EF1B_dimer	Pfam	125	361
IPR001816	Transl_elong_EFTs/EF1B	TIGRFAM	59	369
IPR001816	Transl_elong_EFTs/EF1B	Hamap	60	379
IPR036402	EF-Ts_dimer_sf	Gene3D	219	360

No CAZYmes available for this sequence

External Links

No external refs found!