Seita.3G334800.1

Description : PAS domain-containing protein tyrosine kinase family protein

Gene families : OG_01_0008208 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008208_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G334800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	453	736
IPR013767	PAS_fold	Pfam	112	219
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	Pfam	485	736
IPR000719	Prot_kinase_dom	SMART	484	744
IPR000719	Prot_kinase_dom	ProSiteProfiles	484	745
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	603	615
IPR000014	PAS	CDD	120	221
IPR000014	PAS	ProSiteProfiles	109	180
IPR035965	PAS-like_dom_sf	SUPERFAMILY	109	218
IPR000014	PAS	NCBIfam	110	221
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	597	615
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	663	685
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	644	654
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	707	729
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	558	571
IPR000014	PAS	SMART	111	178
IPR000014	PAS	TIGRFAM	110	221
IPR000719	Prot_kinase_dom	SMART	484	744
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	453	736
IPR000014	PAS	SMART	111	178
IPR000014	PAS	CDD	120	221
IPR000014	PAS	ProSiteProfiles	109	180
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	603	615
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	Pfam	485	736
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	597	615
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	663	685
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	644	654
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	707	729
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	PRINTS	558	571
IPR013767	PAS_fold	Pfam	112	219
IPR000719	Prot_kinase_dom	ProSiteProfiles	484	745
IPR035965	PAS-like_dom_sf	SUPERFAMILY	109	218

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.3G334800.1

Expression Profile

Co-expression Networks

Functional Annotation