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  5. Seita.3G351900.1

Seita.3G351900.1


Description : polyol/monosaccharide transporter 5


Gene families : OG_01_0008406 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008406_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G351900.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_140


Type GO Term Name Evidence Source
MF GO:0015144 carbohydrate transmembrane transporter activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036259 MFS_trans_sf SUPERFAMILY 15 480
IPR003663 Sugar/inositol_transpt PRINTS 406 418
IPR003663 Sugar/inositol_transpt PRINTS 126 145
IPR003663 Sugar/inositol_transpt PRINTS 290 300
IPR003663 Sugar/inositol_transpt PRINTS 43 53
IPR003663 Sugar/inositol_transpt PRINTS 383 404
IPR020846 MFS_dom ProSiteProfiles 35 471
IPR005829 Sugar_transporter_CS ProSitePatterns 131 156
IPR005828 MFS_sugar_transport-like Pfam 35 482
IPR036259 MFS_trans_sf Gene3D 27 485
IPR003663 Sugar/inositol_transpt NCBIfam 29 477
IPR005829 Sugar_transporter_CS ProSitePatterns 334 351
IPR005829 Sugar_transporter_CS ProSitePatterns 89 105
IPR036259 MFS_trans_sf SUPERFAMILY 15 480
IPR020846 MFS_dom ProSiteProfiles 35 471
IPR005829 Sugar_transporter_CS ProSitePatterns 89 105
IPR005829 Sugar_transporter_CS ProSitePatterns 334 351
IPR036259 MFS_trans_sf Gene3D 27 485
IPR005828 MFS_sugar_transport-like Pfam 35 482
IPR045262 STP/PLT_plant PANTHER 19 485
IPR003663 Sugar/inositol_transpt PRINTS 406 418
IPR003663 Sugar/inositol_transpt PRINTS 126 145
IPR003663 Sugar/inositol_transpt PRINTS 290 300
IPR003663 Sugar/inositol_transpt PRINTS 43 53
IPR003663 Sugar/inositol_transpt PRINTS 383 404
IPR005829 Sugar_transporter_CS ProSitePatterns 131 156
IPR003663 Sugar/inositol_transpt TIGRFAM 29 477

No CAZYmes available for this sequence

No external refs found!