Seita.3G354600.1

Description : Regulator of Vps4 activity in the MVB pathway protein

Gene families : OG_01_0015894 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015894_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G354600.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013083	Znf_RING/FYVE/PHD	Gene3D	49	161
IPR001607	Znf_UBP	Pfam	79	137
IPR001607	Znf_UBP	ProSiteProfiles	53	157
IPR001607	Znf_UBP	SMART	78	127
IPR001607	Znf_UBP	ProSiteProfiles	77	138
IPR001607	Znf_UBP	Pfam	79	137
IPR001607	Znf_UBP	SMART	78	127
IPR013083	Znf_RING/FYVE/PHD	Gene3D	49	161

No CAZYmes available for this sequence

External Links

No external refs found!