Sevir.6G130300.1

Description : Homeodomain-like superfamily protein

Gene families : OG_01_0013642 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013642_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G130300.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G130300.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_56

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003700	DNA-binding transcription factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006447	Myb_dom_plants	TIGRFAM	47	102
IPR017930	Myb_dom	Pfam	50	100
IPR009057	Homeobox-like_sf	SUPERFAMILY	47	102
IPR025756	Myb_CC_LHEQLE	Pfam	142	187
IPR017930	Myb_dom	ProSiteProfiles	44	104

No CAZYmes available for this sequence

External Links

No external refs found!