Seita.3G400100.1

Description : LRR and NB-ARC domains-containing disease resistance protein

Gene families : OG_01_0000033 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000033_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.3G400100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	Gene3D	152	317
IPR041118	Rx_N	Pfam	14	98
IPR027417	P-loop_NTPase	SUPERFAMILY	169	418
IPR039203	RGA2/3-like	PANTHER	21	464
IPR036388	WH-like_DNA-bd_sf	Gene3D	404	464
IPR003141	Pol/His_phosphatase_N	SMART	501	566
IPR004013	PHP_dom	Pfam	502	565
IPR042197	Apaf_helical	Gene3D	329	403
IPR016195	Pol/histidinol_Pase-like	SUPERFAMILY	500	590
IPR002182	NB-ARC	Pfam	172	406
IPR044974	Disease_R_plants	PANTHER	3	463
IPR016195	Pol/histidinol_Pase-like	SUPERFAMILY	500	590
IPR042197	Apaf_helical	Gene3D	329	403
IPR002182	NB-ARC	Pfam	171	405
IPR027417	P-loop_NTPase	SUPERFAMILY	169	418
IPR041118	Rx_N	Pfam	14	98
IPR036388	WH-like_DNA-bd_sf	Gene3D	404	464
IPR003141	Pol/His_phosphatase_N	SMART	501	566
IPR004013	PHP_dom	Pfam	502	564
IPR027417	P-loop_NTPase	Gene3D	152	317

No CAZYmes available for this sequence

External Links

No external refs found!