Seita.4G009400.1

Description : 6-phosphogluconate dehydrogenase family protein

Gene families : OG_01_0004218 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004218_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G009400.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_24

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019362	pyridine nucleotide metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046496	nicotinamide nucleotide metabolic process	None	Extended
MF	GO:0050661	NADP binding	ISM	GOs from InterProScan
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006113	6PGDH_Gnd/GntZ	NCBIfam	6	472
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	4	178
IPR006113	6PGDH_Gnd/GntZ	PIRSF	1	479
IPR006183	Pgluconate_DH	PRINTS	361	383
IPR006183	Pgluconate_DH	PRINTS	122	147
IPR006183	Pgluconate_DH	PRINTS	4	27
IPR006183	Pgluconate_DH	PRINTS	171	199
IPR006183	Pgluconate_DH	PRINTS	69	98
IPR006183	Pgluconate_DH	PRINTS	253	280
IPR006114	6PGDH_C	SMART	182	472
IPR013328	6PGD_dom2	Gene3D	184	438
IPR006114	6PGDH_C	Pfam	182	471
IPR006183	Pgluconate_DH	PANTHER	4	473
IPR006115	6PGDH_NADP-bd	Pfam	5	177
IPR008927	6-PGluconate_DH-like_C_sf	SUPERFAMILY	180	473
IPR006183	Pgluconate_DH	PRINTS	361	383
IPR006183	Pgluconate_DH	PRINTS	122	147
IPR006183	Pgluconate_DH	PRINTS	4	27
IPR006183	Pgluconate_DH	PRINTS	171	199
IPR006183	Pgluconate_DH	PRINTS	69	98
IPR006183	Pgluconate_DH	PRINTS	253	280
IPR006113	6PGDH_Gnd/GntZ	TIGRFAM	6	472
IPR006113	6PGDH_Gnd/GntZ	PIRSF	1	479
IPR006114	6PGDH_C	SMART	182	472
IPR006114	6PGDH_C	Pfam	182	471
IPR006183	Pgluconate_DH	PANTHER	3	477
IPR013328	6PGD_dom2	Gene3D	184	438
IPR006115	6PGDH_NADP-bd	Pfam	5	177
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	4	178
IPR008927	6-PGluconate_DH-like_C_sf	SUPERFAMILY	180	473

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.4G009400.1

Expression Profile

Co-expression Networks

Functional Annotation