Seita.4G022300.1

Description : Glycosyl hydrolase superfamily protein

Gene families : OG_01_0020949 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020949_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G022300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	50	368
IPR000490	Glyco_hydro_17	Pfam	50	368
IPR044965	Glyco_hydro_17_plant	PANTHER	49	373
IPR044965	Glyco_hydro_17_plant	PANTHER	32	425
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	50	368
IPR000490	Glyco_hydro_17	Pfam	50	368

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH17	311	450	6.6e-113	50	368

External Links

No external refs found!