- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Transketolase
Gene families : OG_01_0000540 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000540_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G023100.1 | |
| Cluster | Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | ISM | GOs from InterProScan |
| MF | GO:0004802 | transketolase activity | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR009014 | Transketo_C/PFOR_II | Gene3D | 617 | 743 |
| IPR033247 | Transketolase_fam | PANTHER | 82 | 742 |
| IPR029061 | THDP-binding | SUPERFAMILY | 83 | 410 |
| IPR033248 | Transketolase_C | Pfam | 630 | 736 |
| IPR049557 | Transketolase_CS | ProSitePatterns | 92 | 112 |
| IPR005474 | Transketolase_N | Pfam | 86 | 417 |
| IPR009014 | Transketo_C/PFOR_II | SUPERFAMILY | 610 | 742 |
| IPR005475 | Transketolase-like_Pyr-bd | Pfam | 435 | 605 |
| IPR005478 | Transketolase_bac-like | NCBIfam | 86 | 742 |
| IPR005475 | Transketolase-like_Pyr-bd | SMART | 434 | 606 |
| IPR005474 | Transketolase_N | CDD | 89 | 356 |
| IPR029061 | THDP-binding | SUPERFAMILY | 417 | 606 |
| IPR029061 | THDP-binding | SUPERFAMILY | 83 | 410 |
| IPR009014 | Transketo_C/PFOR_II | SUPERFAMILY | 610 | 742 |
| IPR009014 | Transketo_C/PFOR_II | Gene3D | 617 | 743 |
| IPR033247 | Transketolase_fam | PANTHER | 8 | 742 |
| IPR005474 | Transketolase_N | CDD | 89 | 356 |
| IPR005475 | Transketolase-like_Pyr-bd | Pfam | 435 | 605 |
| IPR029061 | THDP-binding | SUPERFAMILY | 417 | 606 |
| IPR005474 | Transketolase_N | ProSitePatterns | 92 | 112 |
| IPR033248 | Transketolase_C | Pfam | 630 | 736 |
| IPR005474 | Transketolase_N | Pfam | 86 | 417 |
| IPR005478 | Transketolase_bac-like | TIGRFAM | 86 | 742 |
| IPR005475 | Transketolase-like_Pyr-bd | SMART | 434 | 606 |
No CAZYmes available for this sequence
| No external refs found! |