Seita.4G077400.1

Description : kinesin like protein for actin based chloroplast movement 1

Gene families : OG_01_0003649 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003649_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G077400.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_88

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	ISM	GOs from InterProScan
MF	GO:0008017	microtubule binding	ISM	GOs from InterProScan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	None	Extended
BP	GO:0009902	chloroplast relocation	None	Extended
BP	GO:0009904	chloroplast accumulation movement	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019750	chloroplast localization	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051644	plastid localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0051667	establishment of plastid localization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	SUPERFAMILY	121	459
IPR036961	Kinesin_motor_dom_sf	Gene3D	98	461
IPR001752	Kinesin_motor_dom	ProSiteProfiles	146	460
IPR027640	Kinesin-like_fam	PANTHER	65	688
IPR001752	Kinesin_motor_dom	Pfam	152	459
IPR001752	Kinesin_motor_dom	PRINTS	361	379
IPR001752	Kinesin_motor_dom	PRINTS	410	431
IPR001752	Kinesin_motor_dom	PRINTS	218	239
IPR001752	Kinesin_motor_dom	SMART	144	468
IPR036961	Kinesin_motor_dom_sf	Gene3D	98	461
IPR001752	Kinesin_motor_dom	PRINTS	361	379
IPR001752	Kinesin_motor_dom	PRINTS	410	431
IPR001752	Kinesin_motor_dom	PRINTS	218	239
IPR027417	P-loop_NTPase	SUPERFAMILY	121	459
IPR001752	Kinesin_motor_dom	Pfam	152	459
IPR001752	Kinesin_motor_dom	ProSiteProfiles	146	460
IPR001752	Kinesin_motor_dom	SMART	144	468

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.4G077400.1

Expression Profile

Co-expression Networks

Functional Annotation