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  5. Seita.4G139700.1

Seita.4G139700.1


Description : beta glucosidase 17


Gene families : OG_01_0006293 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006293_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G139700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001360 Glyco_hydro_1 Pfam 42 513
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 37 513
IPR001360 Glyco_hydro_1 PRINTS 486 498
IPR001360 Glyco_hydro_1 PRINTS 441 452
IPR001360 Glyco_hydro_1 PRINTS 462 479
IPR001360 Glyco_hydro_1 PRINTS 342 356
IPR001360 Glyco_hydro_1 PRINTS 418 426
IPR001360 Glyco_hydro_1 PANTHER 31 510
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 48 62
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 37 513
IPR001360 Glyco_hydro_1 PRINTS 486 498
IPR001360 Glyco_hydro_1 PRINTS 441 452
IPR001360 Glyco_hydro_1 PRINTS 462 479
IPR001360 Glyco_hydro_1 PRINTS 342 356
IPR001360 Glyco_hydro_1 PRINTS 418 426
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 48 62
IPR001360 Glyco_hydro_1 PANTHER 12 514
IPR001360 Glyco_hydro_1 Pfam 41 513
HMM Family HMM Length Query Length e-Value Query Start Query End
GH1 429 516 1.5e-181 41 514
No external refs found!