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  5. Seita.4G163400.1

Seita.4G163400.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005972 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005972_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G163400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 9 243
IPR001680 WD40_rpt ProSiteProfiles 528 550
IPR016024 ARM-type_fold SUPERFAMILY 927 1249
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 26 651
IPR001680 WD40_rpt SMART 493 541
IPR001680 WD40_rpt SMART 592 639
IPR001680 WD40_rpt SMART 5 42
IPR001680 WD40_rpt SMART 1308 1353
IPR001680 WD40_rpt SMART 51 90
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 5 256
IPR001680 WD40_rpt Pfam 499 541
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 446 753
IPR001680 WD40_rpt ProSiteProfiles 528 550
IPR016024 ARM-type_fold SUPERFAMILY 927 1249
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 26 651
IPR001680 WD40_rpt SMART 493 541
IPR001680 WD40_rpt SMART 592 639
IPR001680 WD40_rpt SMART 5 42
IPR001680 WD40_rpt SMART 1308 1353
IPR001680 WD40_rpt SMART 51 90
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 5 256
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 9 243
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 446 753

No CAZYmes available for this sequence

No external refs found!