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  5. Seita.4G188800.1

Seita.4G188800.1


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0005089 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005089_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G188800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011011 Znf_FYVE_PHD SUPERFAMILY 169 237
IPR001965 Znf_PHD SMART 181 227
IPR019787 Znf_PHD-finger Pfam 182 226
IPR019787 Znf_PHD-finger ProSiteProfiles 179 229
IPR000949 ELM2_dom Pfam 273 370
IPR011124 Znf_CW ProSiteProfiles 321 379
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 182 226
IPR013083 Znf_RING/FYVE/PHD Gene3D 134 239
IPR019787 Znf_PHD-finger Pfam 182 228
IPR019787 Znf_PHD-finger ProSiteProfiles 179 229
IPR000949 ELM2_dom Pfam 273 387
IPR011011 Znf_FYVE_PHD SUPERFAMILY 169 237
IPR013083 Znf_RING/FYVE/PHD Gene3D 134 239
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 182 226
IPR011124 Znf_CW ProSiteProfiles 321 379
IPR001965 Znf_PHD SMART 181 227

No CAZYmes available for this sequence

No external refs found!