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  5. Seita.4G197400.1

Seita.4G197400.1


Description : S-locus lectin protein kinase family protein


Gene families : OG_01_0011094 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011094_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G197400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0004674 protein serine/threonine kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
BP GO:0048544 recognition of pollen ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom Pfam 494 708
IPR000719 Prot_kinase_dom ProSiteProfiles 491 778
IPR000858 S_locus_glycoprot_dom Pfam 204 307
IPR001480 Bulb-type_lectin_dom Pfam 69 171
IPR001480 Bulb-type_lectin_dom SMART 19 145
IPR000719 Prot_kinase_dom SMART 491 768
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 497 519
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 612 624
IPR024171 SRK-like_kinase PIRSF 1 808
IPR001480 Bulb-type_lectin_dom CDD 27 145
IPR003609 Pan_app Pfam 326 396
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 19 143
IPR003609 Pan_app ProSiteProfiles 326 412
IPR003609 Pan_app SMART 327 411
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 70 176
IPR011009 Kinase-like_dom_sf SUPERFAMILY 474 786
IPR036426 Bulb-type_lectin_dom_sf Gene3D 15 142
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 70 176
IPR001480 Bulb-type_lectin_dom Pfam 69 171
IPR000719 Prot_kinase_dom SMART 491 768
IPR001245 Ser-Thr/Tyr_kinase_cat_dom Pfam 494 709
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 19 143
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 497 519
IPR000719 Prot_kinase_dom ProSiteProfiles 491 778
IPR003609 Pan_app SMART 327 411
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 612 624
IPR001480 Bulb-type_lectin_dom CDD 27 145
IPR001480 Bulb-type_lectin_dom SMART 19 145
IPR024171 SRK-like_kinase PIRSF 1 808
IPR003609 Pan_app Pfam 326 396
IPR036426 Bulb-type_lectin_dom_sf Gene3D 15 142
IPR000858 S_locus_glycoprot_dom Pfam 204 307
IPR003609 Pan_app ProSiteProfiles 326 412
IPR011009 Kinase-like_dom_sf SUPERFAMILY 474 786

No CAZYmes available for this sequence

No external refs found!