1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G212700.1

Seita.4G212700.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0013726 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013726_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G212700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0003729 mRNA binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom SMART 51 123
IPR035979 RBD_domain_sf SUPERFAMILY 49 147
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 41 133
IPR000504 RRM_dom Pfam 52 107
IPR000504 RRM_dom ProSiteProfiles 50 127
IPR000504 RRM_dom Pfam 52 107
IPR000504 RRM_dom ProSiteProfiles 50 127
IPR000504 RRM_dom SMART 51 123
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 41 133
IPR035979 RBD_domain_sf SUPERFAMILY 49 147

No CAZYmes available for this sequence

No external refs found!