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Description : CDC27 family protein
Gene families : OG_01_0003216 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003216_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G213000.1 | |
| Cluster | Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_136 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 34 | 496 |
| IPR019734 | TPR_repeat | Pfam | 107 | 135 |
| IPR019734 | TPR_repeat | Pfam | 571 | 599 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 424 | 496 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 703 | 736 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 631 | 734 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 1 | 159 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 567 | 600 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 601 | 634 |
| IPR001440 | TPR_1 | Pfam | 602 | 633 |
| IPR019734 | TPR_repeat | SMART | 601 | 634 |
| IPR019734 | TPR_repeat | SMART | 669 | 702 |
| IPR019734 | TPR_repeat | SMART | 465 | 498 |
| IPR019734 | TPR_repeat | SMART | 104 | 137 |
| IPR019734 | TPR_repeat | SMART | 635 | 668 |
| IPR019734 | TPR_repeat | SMART | 567 | 600 |
| IPR019734 | TPR_repeat | SMART | 703 | 736 |
| IPR019734 | TPR_repeat | SMART | 533 | 566 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 533 | 737 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 533 | 566 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 498 | 630 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 104 | 137 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 635 | 668 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 533 | 737 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 424 | 496 |
| IPR001440 | TPR_1 | Pfam | 602 | 633 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 34 | 496 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 631 | 734 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 703 | 736 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 104 | 137 |
| IPR019734 | TPR_repeat | Pfam | 572 | 598 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 635 | 668 |
| IPR019734 | TPR_repeat | SMART | 669 | 702 |
| IPR019734 | TPR_repeat | SMART | 601 | 634 |
| IPR019734 | TPR_repeat | SMART | 465 | 498 |
| IPR019734 | TPR_repeat | SMART | 104 | 137 |
| IPR019734 | TPR_repeat | SMART | 635 | 668 |
| IPR019734 | TPR_repeat | SMART | 567 | 600 |
| IPR019734 | TPR_repeat | SMART | 533 | 566 |
| IPR019734 | TPR_repeat | SMART | 703 | 736 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 498 | 630 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 567 | 600 |
| IPR019734 | TPR_repeat | Pfam | 108 | 135 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 601 | 634 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 1 | 159 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 533 | 566 |
No CAZYmes available for this sequence
| No external refs found! |