Seita.4G216700.1

Description : Putative glycosyl hydrolase of unknown function (DUF1680)

Gene families : OG_01_0000551 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000551_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G216700.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR049046	Beta-AFase-like_GH127_middle	Pfam	524	626
IPR008928	6-hairpin_glycosidase_sf	SUPERFAMILY	173	449
IPR012878	Beta-AFase-like_GH127_cat	Pfam	121	511
IPR012878	Beta-AFase-like_GH127_cat	Pfam	121	655
IPR008928	6-hairpin_glycosidase_sf	SUPERFAMILY	173	449

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH146	503	901	2.2e-167	120	655

External Links

No external refs found!