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  5. Seita.4G219700.1

Seita.4G219700.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0009010 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009010_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.4G219700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom CDD 148 211
IPR011992 EF-hand-dom_pair SUPERFAMILY 53 216
IPR002048 EF_hand_dom ProSiteProfiles 143 178
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 156 168
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 66 78
IPR002048 EF_hand_dom SMART 147 175
IPR002048 EF_hand_dom SMART 185 213
IPR002048 EF_hand_dom SMART 57 85
IPR002048 EF_hand_dom SMART 93 121
IPR002048 EF_hand_dom ProSiteProfiles 181 216
IPR002048 EF_hand_dom ProSiteProfiles 53 88
IPR002048 EF_hand_dom Pfam 56 115
IPR002048 EF_hand_dom Pfam 146 210
IPR002048 EF_hand_dom CDD 57 115
IPR002048 EF_hand_dom ProSiteProfiles 53 88
IPR002048 EF_hand_dom CDD 148 211
IPR002048 EF_hand_dom ProSiteProfiles 181 216
IPR011992 EF-hand-dom_pair SUPERFAMILY 53 216
IPR002048 EF_hand_dom CDD 57 115
IPR002048 EF_hand_dom Pfam 55 117
IPR002048 EF_hand_dom Pfam 145 210
IPR002048 EF_hand_dom SMART 147 175
IPR002048 EF_hand_dom SMART 185 213
IPR002048 EF_hand_dom SMART 57 85
IPR002048 EF_hand_dom SMART 93 121
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 66 78
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 156 168
IPR002048 EF_hand_dom ProSiteProfiles 143 178

No CAZYmes available for this sequence

No external refs found!