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  5. Seita.5G011400.1

Seita.5G011400.1


Description : Thiamine pyrophosphate dependent pyruvate decarboxylase family protein


Gene families : OG_01_0007510 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007510_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G011400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0030976 thiamine pyrophosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom Pfam 106 232
IPR029035 DHS-like_NAD/FAD-binding_dom SUPERFAMILY 104 260
IPR000399 TPP-bd_CS ProSitePatterns 340 359
IPR029061 THDP-binding SUPERFAMILY 295 462
IPR029061 THDP-binding SUPERFAMILY 2 76
IPR045025 HACL1-like PANTHER 1 472
IPR011766 TPP_enzyme_TPP-bd Pfam 304 455
IPR012000 Thiamin_PyroP_enz_cen_dom Pfam 106 232
IPR045025 HACL1-like PANTHER 1 472
IPR029035 DHS-like_NAD/FAD-binding_dom SUPERFAMILY 104 260
IPR000399 TPP-bd_CS ProSitePatterns 340 359
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom Pfam 2 76
IPR011766 TPP_enzyme_TPP-bd Pfam 304 455
IPR029061 THDP-binding SUPERFAMILY 2 76
IPR029061 THDP-binding SUPERFAMILY 295 462

No CAZYmes available for this sequence

No external refs found!