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  5. Seita.5G015400.1

Seita.5G015400.1


Description : manganese tracking factor for mitochondrial SOD2


Gene families : OG_01_0001721 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001721_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G015400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5


Type GO Term Name Evidence Source
BP GO:1990542 mitochondrial transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 22 140
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 152 251
IPR045315 Mtm1-like PANTHER 16 357
IPR023395 Mt_carrier_dom_sf Gene3D 87 359
IPR018108 Mitochondrial_sb/sol_carrier Pfam 152 253
IPR018108 Mitochondrial_sb/sol_carrier Pfam 22 143
IPR018108 Mitochondrial_sb/sol_carrier Pfam 267 356
IPR023395 Mt_carrier_dom_sf Gene3D 12 86
IPR023395 Mt_carrier_dom_sf SUPERFAMILY 22 348
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 264 352
IPR018108 Mitochondrial_sb/sol_carrier Pfam 22 143
IPR018108 Mitochondrial_sb/sol_carrier Pfam 152 253
IPR018108 Mitochondrial_sb/sol_carrier Pfam 268 356
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 152 251
IPR045315 Mtm1-like PANTHER 1 359
IPR023395 Mt_carrier_dom_sf Gene3D 87 359
IPR023395 Mt_carrier_dom_sf Gene3D 12 86
IPR023395 Mt_carrier_dom_sf SUPERFAMILY 22 348
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 264 352
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 22 140

No CAZYmes available for this sequence

No external refs found!