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  5. Seita.5G027600.1

Seita.5G027600.1


Description : ATP citrate lyase subunit B 2


Gene families : OG_01_0008424 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008424_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G027600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016102 Succinyl-CoA_synth-like Gene3D 138 323
IPR033847 Citrt_syn/SCS-alpha_CS ProSitePatterns 174 203
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 7 136
IPR017866 Succ-CoA_synthase_bsu_CS ProSitePatterns 168 193
IPR016143 Citrate_synth-like_sm_a-sub Gene3D 450 547
IPR036969 Citrate_synthase_sf SUPERFAMILY 129 604
IPR002020 Citrate_synthase PANTHER 4 607
IPR017440 Cit_synth/succinyl-CoA_lig_AS ProSitePatterns 259 275
IPR005811 SUCC_ACL_C Pfam 173 298
IPR002020 Citrate_synthase Pfam 401 598
IPR017440 Cit_synth/succinyl-CoA_lig_AS ProSitePatterns 259 275
IPR016102 Succinyl-CoA_synth-like Gene3D 138 323
IPR033847 Citrt_syn/SCS-alpha_CS ProSitePatterns 174 203
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 7 136
IPR036969 Citrate_synthase_sf SUPERFAMILY 129 604
IPR005811 SUCC_ACL_C Pfam 174 298
IPR002020 Citrate_synthase Pfam 398 597
IPR017866 Succ-CoA_synthase_bsu_CS ProSitePatterns 168 193
IPR016143 Citrate_synth-like_sm_a-sub Gene3D 450 547

No CAZYmes available for this sequence

No external refs found!