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  5. Seita.5G031800.1

Seita.5G031800.1


Description : P-glycoprotein 21


Gene families : OG_01_0004162 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004162_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G031800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003439 ABC_transporter-like_ATP-bd Pfam 1048 1151
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 1029 1232
IPR027417 P-loop_NTPase Gene3D 375 624
IPR027417 P-loop_NTPase SUPERFAMILY 377 623
IPR011527 ABC1_TM_dom ProSiteProfiles 63 350
IPR036640 ABC1_TM_sf SUPERFAMILY 695 1009
IPR011527 ABC1_TM_dom Pfam 63 336
IPR011527 ABC1_TM_dom Pfam 707 978
IPR036640 ABC1_TM_sf Gene3D 680 1017
IPR011527 ABC1_TM_dom ProSiteProfiles 708 994
IPR036640 ABC1_TM_sf Gene3D 49 630
IPR036640 ABC1_TM_sf SUPERFAMILY 49 367
IPR039421 Type_1_exporter PANTHER 44 623
IPR017871 ABC_transporter-like_CS ProSitePatterns 524 538
IPR003593 AAA+_ATPase SMART 1056 1167
IPR003593 AAA+_ATPase SMART 412 598
IPR027417 P-loop_NTPase SUPERFAMILY 1020 1196
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 385 621
IPR027417 P-loop_NTPase Gene3D 1019 1170
IPR003439 ABC_transporter-like_ATP-bd Pfam 404 552
IPR027417 P-loop_NTPase SUPERFAMILY 377 623
IPR011527 ABC1_TM_dom Pfam 707 977
IPR011527 ABC1_TM_dom Pfam 62 336
IPR011527 ABC1_TM_dom ProSiteProfiles 708 994
IPR036640 ABC1_TM_sf Gene3D 49 630
IPR003439 ABC_transporter-like_ATP-bd Pfam 1049 1160
IPR011527 ABC1_TM_dom ProSiteProfiles 63 350
IPR017871 ABC_transporter-like_CS ProSitePatterns 524 538
IPR027417 P-loop_NTPase Gene3D 375 624
IPR036640 ABC1_TM_sf Gene3D 680 1017
IPR027417 P-loop_NTPase Gene3D 1019 1170
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 1029 1232
IPR003593 AAA+_ATPase SMART 1056 1167
IPR003593 AAA+_ATPase SMART 412 598
IPR027417 P-loop_NTPase SUPERFAMILY 1020 1196
IPR003439 ABC_transporter-like_ATP-bd Pfam 404 552
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 385 621
IPR036640 ABC1_TM_sf SUPERFAMILY 695 1009
IPR036640 ABC1_TM_sf SUPERFAMILY 49 367

No CAZYmes available for this sequence

No external refs found!