Seita.5G042900.1

Description : isocitrate dehydrogenase V

Gene families : OG_01_0000667 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000667_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G042900.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_186

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004448	isocitrate dehydrogenase [NAD(P)+] activity	None	Extended
MF	GO:0004449	isocitrate dehydrogenase (NAD+) activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0051287	NAD binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024084	IsoPropMal-DH-like_dom	Pfam	38	361
IPR024084	IsoPropMal-DH-like_dom	SMART	36	361
IPR004434	Isocitrate_DH_NAD	NCBIfam	35	363
IPR019818	IsoCit/isopropylmalate_DH_CS	ProSitePatterns	256	275
IPR024084	IsoPropMal-DH-like_dom	SMART	36	361
IPR024084	IsoPropMal-DH-like_dom	Pfam	38	361
IPR019818	IsoCit/isopropylmalate_DH_CS	ProSitePatterns	256	275
IPR004434	Isocitrate_DH_NAD	TIGRFAM	35	363

No CAZYmes available for this sequence

External Links

No external refs found!