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  5. Seita.5G059300.1

Seita.5G059300.1


Description : importin alpha isoform 1


Gene families : OG_01_0001840 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001840_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G059300.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006606 protein import into nucleus ISM GOs from InterProScan
MF GO:0061608 nuclear import signal receptor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036975 Importin-a_IBB_sf Gene3D 11 50
IPR002652 Importin-a_IBB Pfam 12 91
IPR000225 Armadillo ProSiteProfiles 155 197
IPR000225 Armadillo Pfam 355 394
IPR000225 Armadillo Pfam 144 183
IPR000225 Armadillo Pfam 240 268
IPR000225 Armadillo Pfam 271 309
IPR000225 Armadillo Pfam 102 142
IPR000225 Armadillo Pfam 186 227
IPR000225 Armadillo Pfam 398 437
IPR000225 Armadillo Pfam 313 353
IPR032413 Arm_3 Pfam 453 499
IPR016024 ARM-type_fold SUPERFAMILY 13 496
IPR011989 ARM-like Gene3D 69 492
IPR000225 Armadillo ProSiteProfiles 112 155
IPR000225 Armadillo SMART 312 353
IPR000225 Armadillo SMART 101 142
IPR000225 Armadillo SMART 229 268
IPR000225 Armadillo SMART 398 438
IPR000225 Armadillo SMART 270 310
IPR000225 Armadillo SMART 144 184
IPR000225 Armadillo SMART 355 395
IPR000225 Armadillo SMART 186 227
IPR000225 Armadillo ProSiteProfiles 239 281
IPR024931 Importin_alpha PIRSF 2 523
IPR000225 Armadillo ProSiteProfiles 323 366
IPR002652 Importin-a_IBB ProSiteProfiles 1 58
IPR024931 Importin_alpha PIRSF 2 523
IPR002652 Importin-a_IBB Pfam 12 91
IPR000225 Armadillo ProSiteProfiles 112 155
IPR000225 Armadillo ProSiteProfiles 239 281
IPR000225 Armadillo ProSiteProfiles 323 366
IPR002652 Importin-a_IBB ProSiteProfiles 1 58
IPR032413 Arm_3 Pfam 453 500
IPR016024 ARM-type_fold SUPERFAMILY 13 496
IPR000225 Armadillo ProSiteProfiles 155 197
IPR000225 Armadillo Pfam 271 309
IPR000225 Armadillo Pfam 102 142
IPR000225 Armadillo Pfam 355 394
IPR000225 Armadillo Pfam 240 267
IPR000225 Armadillo Pfam 144 183
IPR000225 Armadillo Pfam 186 227
IPR000225 Armadillo Pfam 313 353
IPR000225 Armadillo Pfam 399 436
IPR000225 Armadillo SMART 312 353
IPR000225 Armadillo SMART 101 142
IPR000225 Armadillo SMART 229 268
IPR000225 Armadillo SMART 398 438
IPR000225 Armadillo SMART 270 310
IPR000225 Armadillo SMART 144 184
IPR000225 Armadillo SMART 355 395
IPR000225 Armadillo SMART 186 227
IPR011989 ARM-like Gene3D 69 492
IPR036975 Importin-a_IBB_sf Gene3D 11 50

No CAZYmes available for this sequence

No external refs found!