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  5. Seita.5G098300.1

Seita.5G098300.1


Description : Duplicated homeodomain-like superfamily protein


Gene families : OG_01_0005071 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005071_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G098300.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001005 SANT/Myb SMART 26 77
IPR001005 SANT/Myb SMART 139 189
IPR001005 SANT/Myb ProSiteProfiles 135 187
IPR001005 SANT/Myb CDD 142 187
IPR001005 SANT/Myb ProSiteProfiles 30 75
IPR001005 SANT/Myb CDD 29 74
IPR017884 SANT_dom ProSiteProfiles 25 79
IPR009057 Homeobox-like_sf SUPERFAMILY 136 191
IPR017930 Myb_dom ProSiteProfiles 135 191
IPR006447 Myb_dom_plants NCBIfam 138 189
IPR001005 SANT/Myb Pfam 29 73
IPR001005 SANT/Myb Pfam 141 187
IPR009057 Homeobox-like_sf SUPERFAMILY 28 79
IPR017884 SANT_dom ProSiteProfiles 143 191
IPR001005 SANT/Myb CDD 29 74
IPR017930 Myb_dom Pfam 29 74
IPR017930 Myb_dom Pfam 142 186
IPR001005 SANT/Myb CDD 142 187
IPR017930 Myb_dom ProSiteProfiles 135 191
IPR001005 SANT/Myb SMART 26 77
IPR001005 SANT/Myb SMART 139 189
IPR009057 Homeobox-like_sf SUPERFAMILY 136 191
IPR017884 SANT_dom ProSiteProfiles 143 191
IPR001005 SANT/Myb ProSiteProfiles 135 187
IPR001005 SANT/Myb ProSiteProfiles 30 75
IPR006447 Myb_dom_plants TIGRFAM 138 189
IPR009057 Homeobox-like_sf SUPERFAMILY 28 79
IPR017884 SANT_dom ProSiteProfiles 25 79

No CAZYmes available for this sequence

No external refs found!