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  5. Sevir.6G172100.1

Sevir.6G172100.1


Description : eukaryotic translation initiation factor 3C


Gene families : OG_01_0024756 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0024756_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G172100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G172100.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_34


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0003743 translation initiation factor activity ISM GOs from InterProScan
CC GO:0005852 eukaryotic translation initiation factor 3 complex ISM GOs from InterProScan
BP GO:0006413 translational initiation ISM GOs from InterProScan
MF GO:0031369 translation initiation factor binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036388 WH-like_DNA-bd_sf Gene3D 743 812
IPR027516 EIF3C PANTHER 1 921
IPR036390 WH_DNA-bd_sf SUPERFAMILY 744 809
IPR008905 EIF3C_N_dom Pfam 77 669
IPR027516 EIF3C Hamap 31 879
IPR000717 PCI_dom SMART 739 827
IPR000717 PCI_dom Pfam 705 806
IPR000717 PCI_dom ProSiteProfiles 639 810

No CAZYmes available for this sequence

No external refs found!