Seita.5G116600.1

Description : Ca-2+ dependent nuclease

Gene families : OG_01_0002027 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002027_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G116600.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016071	Staphylococal_nuclease_OB-fold	ProSiteProfiles	150	318
IPR002071	Thermonucl_AS	ProSitePatterns	263	273
IPR035437	SNase_OB-fold_sf	Gene3D	208	331
IPR016071	Staphylococal_nuclease_OB-fold	Pfam	223	317
IPR035437	SNase_OB-fold_sf	SUPERFAMILY	149	325
IPR016071	Staphylococal_nuclease_OB-fold	SMART	141	318
IPR016071	Staphylococal_nuclease_OB-fold	Pfam	223	317
IPR035437	SNase_OB-fold_sf	SUPERFAMILY	149	325
IPR035437	SNase_OB-fold_sf	Gene3D	208	331
IPR016071	Staphylococal_nuclease_OB-fold	SMART	141	318
IPR002071	Thermonucl_AS	ProSitePatterns	263	273
IPR016071	Staphylococal_nuclease_OB-fold	ProSiteProfiles	150	318

No CAZYmes available for this sequence

External Links

No external refs found!