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  5. Sevir.6G173000.1

Sevir.6G173000.1


Description : D-3-phosphoglycerate dehydrogenase


Gene families : OG_01_0000626 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000626_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G173000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G173000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_70


Type GO Term Name Evidence Source
MF GO:0004617 phosphoglycerate dehydrogenase activity ISM GOs from InterProScan
BP GO:0006564 L-serine biosynthetic process ISM GOs from InterProScan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ISM GOs from InterProScan
MF GO:0051287 NAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006140 D-isomer_DH_NAD-bd Pfam 183 358
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 177 359
IPR045626 PGDH_ASB_dom Pfam 402 489
IPR029753 D-isomer_DH_CS ProSitePatterns 297 313
IPR029752 D-isomer_DH_CS1 ProSitePatterns 220 247
IPR029009 ASB_dom_sf Gene3D 395 547
IPR029009 ASB_dom_sf SUPERFAMILY 396 543
IPR002912 ACT_dom Pfam 554 607
IPR045865 ACT-like_dom_sf SUPERFAMILY 538 616
IPR006236 PGDH TIGRFAM 81 620
IPR006139 D-isomer_2_OHA_DH_cat_dom Pfam 81 390
IPR015878 Ado_hCys_hydrolase_NAD-bd SMART 208 362
IPR002912 ACT_dom ProSiteProfiles 549 621
IPR029753 D-isomer_DH_CS ProSitePatterns 268 290

No CAZYmes available for this sequence

No external refs found!