Seita.5G140000.1

Description : partner of SLD five 1

Gene families : OG_01_0007626 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007626_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G140000.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116

Type	GO Term	Name	Evidence	Source
CC	GO:0000811	GINS complex	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0031261	DNA replication preinitiation complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005339	GINS_Psf1	PANTHER	1	196
IPR005339	GINS_Psf1	CDD	3	136
IPR036224	GINS_bundle-like_dom_sf	SUPERFAMILY	1	146
IPR021151	GINS_A	Pfam	47	117
IPR005339	GINS_Psf1	PANTHER	1	193
IPR036224	GINS_bundle-like_dom_sf	SUPERFAMILY	1	146
IPR021151	GINS_A	Pfam	47	117
IPR005339	GINS_Psf1	CDD	3	136

No CAZYmes available for this sequence

External Links

No external refs found!