Seita.5G174400.1

Description : arginine-rich cyclin 1

Gene families : OG_01_0019444 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019444_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G174400.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	ISM	GOs from InterProScan
MF	GO:0019207	kinase regulator activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036915	Cyclin-like_sf	SUPERFAMILY	152	251
IPR036915	Cyclin-like_sf	SUPERFAMILY	4	147
IPR006671	Cyclin_N	Pfam	14	147
IPR013763	Cyclin-like_dom	SMART	156	237
IPR013763	Cyclin-like_dom	SMART	40	143
IPR043198	Cyclin/Ssn8	PANTHER	9	373
IPR036915	Cyclin-like_sf	SUPERFAMILY	4	147
IPR036915	Cyclin-like_sf	SUPERFAMILY	152	251
IPR043198	Cyclin/Ssn8	PANTHER	11	361
IPR006671	Cyclin_N	Pfam	14	147
IPR013763	Cyclin-like_dom	SMART	156	237
IPR013763	Cyclin-like_dom	SMART	40	143
IPR013763	Cyclin-like_dom	CDD	153	217
IPR013763	Cyclin-like_dom	CDD	34	142

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.5G174400.1

Expression Profile

Co-expression Networks

Functional Annotation