Seita.5G176700.1

No description available

Gene families : OG_01_0099552 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0099552_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G176700.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0000124	SAGA complex	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0070461	SAGA-type complex	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905368	peptidase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR046468	Spt20-like_SEP	Pfam	78	223
IPR021950	Spt20	PANTHER	73	556
IPR021950	Spt20	PANTHER	1231	1371
IPR021950	Spt20	PANTHER	403	559
IPR021950	Spt20	PANTHER	742	1155
IPR021950	Spt20	PANTHER	1	419
IPR021950	Spt20	PANTHER	1158	1230
IPR021950	Spt20	PANTHER	554	752

No CAZYmes available for this sequence

External Links

No external refs found!