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  5. Seita.5G180700.1

Seita.5G180700.1


Description : HEAT repeat-containing protein


Gene families : OG_01_0000983 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000983_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G180700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005802 trans-Golgi network ISM GOs from InterProScan
BP GO:0032367 intracellular cholesterol transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011989 ARM-like Gene3D 441 818
IPR011989 ARM-like Gene3D 825 1111
IPR016024 ARM-type_fold SUPERFAMILY 479 1100
IPR006594 LisH ProSiteProfiles 12 44
IPR006594 LisH SMART 12 44
IPR006594 LisH SMART 159 191
IPR040362 RELCH PANTHER 9 1180
IPR006594 LisH ProSiteProfiles 159 191
IPR021133 HEAT_type_2 ProSiteProfiles 948 986
IPR016024 ARM-type_fold SUPERFAMILY 479 1100
IPR006594 LisH SMART 12 44
IPR006594 LisH SMART 159 191
IPR021133 HEAT_type_2 ProSiteProfiles 948 986
IPR006594 LisH ProSiteProfiles 159 191
IPR011989 ARM-like Gene3D 441 818
IPR011989 ARM-like Gene3D 825 1111
IPR040362 RELCH PANTHER 14 1182
IPR006594 LisH ProSiteProfiles 12 44

No CAZYmes available for this sequence

No external refs found!