1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G205900.1

Seita.5G205900.1


Description : carbamoyl phosphate synthetase B


Gene families : OG_01_0007805 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007805_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G205900.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006807 nitrogen compound metabolic process ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036897 CarbamoylP_synth_lsu_oligo_sf SUPERFAMILY 464 622
IPR005479 CbamoylP_synth_lsu-like_ATP-bd ProSitePatterns 233 247
IPR036897 CarbamoylP_synth_lsu_oligo_sf Gene3D 478 621
IPR005479 CbamoylP_synth_lsu-like_ATP-bd Pfam 196 403
IPR005479 CbamoylP_synth_lsu-like_ATP-bd ProSitePatterns 366 373
IPR016185 PreATP-grasp_dom_sf SUPERFAMILY 74 195
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 366 395
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 448 466
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 273 292
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 116 126
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 87 101
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 308 325
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 237 249
IPR011761 ATP-grasp ProSiteProfiles 201 397
IPR016185 PreATP-grasp_dom_sf SUPERFAMILY 623 692
IPR005480 CarbamoylP_synth_lsu_oligo SMART 492 615
IPR005480 CarbamoylP_synth_lsu_oligo Pfam 495 572
IPR005479 CbamoylP_synth_lsu-like_ATP-bd ProSitePatterns 233 247
IPR005480 CarbamoylP_synth_lsu_oligo Pfam 495 572
IPR036897 CarbamoylP_synth_lsu_oligo_sf Gene3D 478 621
IPR005479 CbamoylP_synth_lsu-like_ATP-bd Pfam 196 403
IPR016185 PreATP-grasp_dom_sf SUPERFAMILY 74 195
IPR036897 CarbamoylP_synth_lsu_oligo_sf SUPERFAMILY 464 622
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 366 395
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 448 466
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 273 292
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 116 126
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 87 101
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 308 325
IPR005483 CbamoylP_synth_lsu_CPSase_dom PRINTS 237 249
IPR016185 PreATP-grasp_dom_sf SUPERFAMILY 623 692
IPR005480 CarbamoylP_synth_lsu_oligo SMART 492 615
IPR005479 CbamoylP_synth_lsu-like_ATP-bd ProSitePatterns 366 373
IPR011761 ATP-grasp ProSiteProfiles 201 397

No CAZYmes available for this sequence

No external refs found!