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  5. Seita.5G239200.1

Seita.5G239200.1


Description : peptide deformylase 1B


Gene families : OG_01_0004420 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004420_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G239200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_263


Type GO Term Name Evidence Source
MF GO:0042586 peptide deformylase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023635 Peptide_deformylase PANTHER 76 253
IPR036821 Peptide_deformylase_sf Gene3D 63 255
IPR036821 Peptide_deformylase_sf SUPERFAMILY 77 235
IPR023635 Peptide_deformylase CDD 81 221
IPR023635 Peptide_deformylase Hamap 77 240
IPR023635 Peptide_deformylase Pfam 79 226
IPR023635 Peptide_deformylase PRINTS 179 197
IPR023635 Peptide_deformylase PRINTS 198 227
IPR023635 Peptide_deformylase PRINTS 167 178
IPR023635 Peptide_deformylase PRINTS 108 137
IPR023635 Peptide_deformylase NCBIfam 79 231
IPR023635 Peptide_deformylase CDD 81 221
IPR023635 Peptide_deformylase PRINTS 179 197
IPR023635 Peptide_deformylase PRINTS 198 227
IPR023635 Peptide_deformylase PRINTS 167 178
IPR023635 Peptide_deformylase PRINTS 108 137
IPR036821 Peptide_deformylase_sf Gene3D 63 255
IPR023635 Peptide_deformylase Hamap 77 240
IPR023635 Peptide_deformylase Pfam 80 226
IPR023635 Peptide_deformylase PANTHER 44 246
IPR023635 Peptide_deformylase TIGRFAM 79 231
IPR036821 Peptide_deformylase_sf SUPERFAMILY 77 235

No CAZYmes available for this sequence

No external refs found!