Sevir.1G220300.1

Description : ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein

Gene families : OG_01_0004756 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004756_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G220300.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G220300.1
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_100

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000433	Znf_ZZ	ProSiteProfiles	407	454
IPR032350	N_BRCA1_central	CDD	484	597
IPR013783	Ig-like_fold	Gene3D	480	600
IPR000433	Znf_ZZ	Pfam	410	443
IPR009060	UBA-like_sf	SUPERFAMILY	811	850
IPR009060	UBA-like_sf	SUPERFAMILY	759	806
IPR032350	N_BRCA1_central	Pfam	495	596
IPR000270	PB1_dom	Pfam	24	106
IPR043145	Znf_ZZ_sf	Gene3D	401	461
IPR000270	PB1_dom	SMART	23	108
IPR000270	PB1_dom	ProSiteProfiles	23	108
IPR015940	UBA	ProSiteProfiles	767	805
IPR000433	Znf_ZZ	SMART	407	452

No CAZYmes available for this sequence

External Links

No external refs found!