1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G251400.1

Seita.5G251400.1


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0014565 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014565_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G251400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015915 Kelch-typ_b-propeller Gene3D 190 389
IPR011043 Gal_Oxase/kelch_b-propeller SUPERFAMILY 106 384
IPR001810 F-box_dom Pfam 47 88
IPR001810 F-box_dom SMART 47 87
IPR001810 F-box_dom ProSiteProfiles 47 88
IPR045048 FBXO31/39 PANTHER 40 404
IPR036047 F-box-like_dom_sf SUPERFAMILY 43 147
IPR011498 Kelch_2 Pfam 288 333
IPR001810 F-box_dom Pfam 48 88
IPR036047 F-box-like_dom_sf SUPERFAMILY 43 147
IPR015915 Kelch-typ_b-propeller Gene3D 190 389
IPR011043 Gal_Oxase/kelch_b-propeller SUPERFAMILY 106 384
IPR001810 F-box_dom SMART 47 87
IPR045048 FBXO31/39 PANTHER 7 405
IPR001810 F-box_dom ProSiteProfiles 47 88

No CAZYmes available for this sequence

No external refs found!