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  5. Seita.5G298400.1

Seita.5G298400.1


Description : CHY-type/CTCHY-type/RING-type Zinc finger protein


Gene families : OG_01_0003524 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003524_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G298400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001841 Znf_RING Pfam 196 239
IPR017921 Znf_CTCHY ProSiteProfiles 132 196
IPR008913 Znf_CHY ProSiteProfiles 54 130
IPR001841 Znf_RING SMART 197 239
IPR039512 RCHY1_zinc-ribbon Pfam 244 300
IPR013083 Znf_RING/FYVE/PHD Gene3D 191 242
IPR037275 Znf_CTCHY_sf SUPERFAMILY 133 190
IPR037274 Znf_CHY_sf SUPERFAMILY 58 132
IPR008913 Znf_CHY Pfam 61 135
IPR001841 Znf_RING ProSiteProfiles 197 240
IPR008913 Znf_CHY ProSiteProfiles 54 130
IPR008913 Znf_CHY Pfam 61 142
IPR001841 Znf_RING Pfam 196 239
IPR001841 Znf_RING ProSiteProfiles 197 240
IPR001841 Znf_RING SMART 197 239
IPR037275 Znf_CTCHY_sf SUPERFAMILY 133 190
IPR037274 Znf_CHY_sf SUPERFAMILY 58 132
IPR017921 Znf_CTCHY ProSiteProfiles 132 196
IPR039512 RCHY1_zinc-ribbon Pfam 244 300
IPR013083 Znf_RING/FYVE/PHD Gene3D 191 242

No CAZYmes available for this sequence

No external refs found!