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  5. Sevir.6G193200.1

Sevir.6G193200.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0012452 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012452_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G193200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G193200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_130


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 36 155
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 156 258
IPR035979 RBD_domain_sf SUPERFAMILY 58 156
IPR000504 RRM_dom ProSiteProfiles 72 149
IPR035979 RBD_domain_sf SUPERFAMILY 166 249
IPR000504 RRM_dom ProSiteProfiles 170 249
IPR000504 RRM_dom SMART 73 145
IPR000504 RRM_dom SMART 171 245
IPR000504 RRM_dom Pfam 172 242
IPR000504 RRM_dom Pfam 77 143

No CAZYmes available for this sequence

No external refs found!