Sevir.6G193300.1

Description : Alpha-L RNA-binding motif/Ribosomal protein S4 family protein

Gene families : OG_01_0006788 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006788_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G193300.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G193300.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0019843	rRNA binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002942	S4_RNA-bd	CDD	107	170
IPR002942	S4_RNA-bd	Pfam	107	153
IPR002942	S4_RNA-bd	SMART	107	170
IPR001912	Ribosomal_uS4_N	Pfam	3	62
IPR036986	S4_RNA-bd_sf	Gene3D	107	180
IPR001912	Ribosomal_uS4_N	SMART	3	106
IPR022801	Ribosomal_uS4	PANTHER	1	181

No CAZYmes available for this sequence

External Links

No external refs found!