Sevir.6G194300.2

Description : Plant U-Box 15

Gene families : OG_01_0019008 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019008_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G194300.2	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G194300.2
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_176

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011989	ARM-like	Gene3D	190	481
IPR016024	ARM-type_fold	SUPERFAMILY	207	481
IPR000225	Armadillo	ProSiteProfiles	251	293
IPR003613	Ubox_domain	ProSiteProfiles	116	190
IPR000225	Armadillo	SMART	281	321
IPR000225	Armadillo	SMART	363	403
IPR000225	Armadillo	SMART	240	280
IPR000225	Armadillo	SMART	322	362
IPR000225	Armadillo	ProSiteProfiles	292	334
IPR045210	RING-Ubox_PUB	CDD	121	163
IPR003613	Ubox_domain	Pfam	117	187
IPR003613	Ubox_domain	SMART	120	183
IPR000225	Armadillo	Pfam	240	279
IPR000225	Armadillo	Pfam	323	361
IPR013083	Znf_RING/FYVE/PHD	Gene3D	116	189

No CAZYmes available for this sequence

External Links

No external refs found!