Seita.5G353100.1

Description : Ubiquitin-associated (UBA) protein

Gene families : OG_01_0012494 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012494_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G353100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR035952	Rhomboid-like_sf	Gene3D	13	207
IPR022764	Peptidase_S54_rhomboid_dom	Pfam	47	186
IPR015940	UBA	ProSiteProfiles	246	286
IPR015940	UBA	Pfam	248	283
IPR015940	UBA	SMART	248	285
IPR009060	UBA-like_sf	SUPERFAMILY	241	286
IPR035952	Rhomboid-like_sf	SUPERFAMILY	18	186
IPR015940	UBA	ProSiteProfiles	246	286
IPR009060	UBA-like_sf	SUPERFAMILY	241	286
IPR015940	UBA	SMART	248	285
IPR015940	UBA	Pfam	249	283
IPR035952	Rhomboid-like_sf	Gene3D	13	207
IPR022764	Peptidase_S54_rhomboid_dom	Pfam	47	186
IPR035952	Rhomboid-like_sf	SUPERFAMILY	18	186

No CAZYmes available for this sequence

External Links

No external refs found!