Seita.5G387100.1

Description : Cell division control, Cdc6

Gene families : OG_01_0019383 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019383_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G387100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051301	cell division	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016314	Cdc6/18	PIRSF	3	488
IPR015163	Cdc6_C	SMART	394	474
IPR003593	AAA+_ATPase	Pfam	136	259
IPR036388	WH-like_DNA-bd_sf	Gene3D	384	473
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	379	482
IPR015163	Cdc6_C	CDD	387	470
IPR027417	P-loop_NTPase	Gene3D	95	282
IPR003593	AAA+_ATPase	SMART	136	285
IPR027417	P-loop_NTPase	SUPERFAMILY	105	371
IPR015163	Cdc6_C	Pfam	394	472
IPR015163	Cdc6_C	CDD	387	470
IPR015163	Cdc6_C	SMART	394	474
IPR036388	WH-like_DNA-bd_sf	Gene3D	384	473
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	379	482
IPR015163	Cdc6_C	Pfam	394	472
IPR027417	P-loop_NTPase	Gene3D	95	282
IPR003593	AAA+_ATPase	Pfam	135	252
IPR027417	P-loop_NTPase	SUPERFAMILY	105	371
IPR003593	AAA+_ATPase	SMART	136	285
IPR016314	Cdc6/18	PIRSF	3	488

No CAZYmes available for this sequence

External Links

No external refs found!