Seita.5G406800.1

Description : RNA-binding KH domain-containing protein

Gene families : OG_01_0001014 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001014_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G406800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032377	STAR_dimer	Pfam	35	81
IPR004087	KH_dom	SMART	139	239
IPR036612	KH_dom_type_1_sf	Gene3D	29	271
IPR045071	BBP-like	PANTHER	31	266
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	145	264
IPR045071	BBP-like	PANTHER	5	291
IPR004087	KH_dom	SMART	139	239
IPR032377	STAR_dimer	Pfam	35	81
IPR036612	KH_dom_type_1_sf	Gene3D	29	271
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	145	264

No CAZYmes available for this sequence

External Links

No external refs found!