Seita.5G460200.1

Description : arginine/serine-rich 45

Gene families : OG_01_0005075 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005075_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G460200.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR034201	RNPS1_RRM	CDD	108	180
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	76	244
IPR000504	RRM_dom	ProSiteProfiles	106	184
IPR000504	RRM_dom	Pfam	110	177
IPR000504	RRM_dom	SMART	107	180
IPR035979	RBD_domain_sf	SUPERFAMILY	97	190
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	76	244
IPR000504	RRM_dom	SMART	107	180
IPR034201	RNPS1_RRM	CDD	110	180
IPR000504	RRM_dom	Pfam	110	178
IPR035979	RBD_domain_sf	SUPERFAMILY	97	190
IPR000504	RRM_dom	ProSiteProfiles	106	184

No CAZYmes available for this sequence

External Links

No external refs found!